Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVMSDNTKYIFLSPHLDDAIFSCGDYISKLTSEGEIVLVITIFSGYPLSQQLQPSAKQFHKLCNLGKYPIEE----RKKEDRLACERLQCDFRHLSYYECLYRKDRNGNFLYRHI----------YSELKNEDTLKN--DIIKELLMHLDDKCVVYCPLSLGDHVDHVFVNSIGR-ALEFMRYKVIYYEDFPY-VSDSSMVSY-----MGKTKELKMYQEELDEKHYIDRISSILCYKSQILIIWKSVEKLLNNIKELYLRNG--AAYSIRFWIKK
3DFM Chain:A ((8-265))------TRLLAISPHLDDAVLSFGAGLAQAAQDGANVLVYTVFAGA-AQPPYSPAAQRMHTIWGLA--PDDDAVLYRRKEDIAALDHLRVAHRHGRFLDSIYRKLPDGRWLTAHVEGRQKLAVNDHSPDSDHDLVGEVADDIRSIIDEFDPTLVVTC-AAIGEHPDHEATRDAALFATHEKNVPVRLWEDLPYAVFKSGAVELPQGFRLGSADVSSVKPEMRSQK-----FQAVERYSSQMVLLNGSENNLFDRLDEHARQNAPHGGYGETTW---


General information:
TITO was launched using:
RESULT:

Template: 3DFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1163 -34809 -29.93 -149.39
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -29.93
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_3DFM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DFM-query.scw
PDB file : Tito_Scwrl_3DFM.pdb: