Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIKKWLGLAALATVAGLALAACGNSEKKADNATTIKIATVNRSGSEEKRWDKIQELVK-KDGITLEFTEFTDYSQPNKATADGEVDLNAFQHYNFLNNWNKENGKDLVAIGDTYISPIRLYSGLNGSANKYTKVEDIPANGEIAVPNDATNESRALYLLQSAGLIKLDV---SGTALATVANIKENPKNLKITELDASQTARSLSSVDAAVVNNTFVTEAKLD-YKKALFKEQADENSKQWYNIIVAKKDWETSPKADAIKKVIAAYHTDDVKKVIEESSDGLDQPVW
4QHQ Chain:A ((1-235))----------------------------------VIKVGTV--AGPDSEVWQVVQKVAKEKEGLNVKVIEFNDYVQPNAALDSGDLDANSFQHQPYLDSQVKQRGYKIVSAGLTYISPIGVYS------KKFKSLKDLPQGAKLAVPNDPSNENRALLLLQTQGVIKLKAGAGTGGNNATVLDIAENPKKLKISELDAAQLPRVLSDVDAAVINTNYALAANLQPTKDAIALESL---TSPYANLIAVRAKDKDQP---WVKKLVKAYQSPEVKEFIKKQFKG------


General information:
TITO was launched using:
RESULT:

Template: 4QHQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1270 75381 59.36 327.74
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : 59.36
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_4QHQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QHQ-query.scw
PDB file : Tito_Scwrl_4QHQ.pdb: