Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLATLLLLSTVALAGCSSVQRSLRGDDYVDSSLAAEESSKVAAQSAKELNDALTNENANFPQLSKEVAEDEAEVILHTSQGDIRIKLFPKLAPLAVENFLTHAKEGYYNGITFHRVIDGFMVQTGDPKGDGTGGQSIWHDKDKTKDKGTGFKNEITPYL-YNIRGALAMANTGQPNTNGSQFFINQNSTDTSSKLPTSKYPQKIIEAYKEGGNPSLDGKHPVFGQVIGGMDVVDKIAKAEKDEKD-KPTTAITIDSIEVVKDYDFKS
2OJU Chain:A ((9-160))---------------------------------------------------------------------------VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIW---------GKKFEDEYSEYLKHNVRGVVSMANNG-PNTNGSQFFITY------------------------GKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI--------


General information:
TITO was launched using:
RESULT:

Template: 2OJU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 750 -22536 -30.05 -150.24
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -30.05
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.640

(partial model without unconserved sides chains):
PDB file : Tito_2OJU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OJU-query.scw
PDB file : Tito_Scwrl_2OJU.pdb: