Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKSEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVLGPFQGGVSCIRIALGKGVCGEAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQLLGVLDLDSSEIEDYDAMDRDYLEQFVAILLEKTTWDFTMFEEKS
3KSH Chain:A ((13-155))-------TNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKII---------------


General information:
TITO was launched using:
RESULT:

Template: 3KSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 706 -100614 -142.51 -703.59
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -142.51
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.544

(partial model without unconserved sides chains):
PDB file : Tito_3KSH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KSH-query.scw
PDB file : Tito_Scwrl_3KSH.pdb: