Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQK-DGQTYALAKEEGQ-------HTVGDTVKGFAYT--DMKQKLRLTTLEV-----------TATQDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPE--LKELWPKKGDQLYIRL-EVDK-KDRIWGLLAYQEDF---QRLARPAYNNMQNQNWPAIVYRLKLSGTFVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQMILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI
4Q7J Chain:D ((16-179))-------------IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV-KGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS-------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Q7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 332 -4278 -12.89 -31.46
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain D : 0.60

3D Compatibility (PKB) : -12.89
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.367

(partial model without unconserved sides chains):
PDB file : Tito_4Q7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q7J-query.scw
PDB file : Tito_Scwrl_4Q7J.pdb: