Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRLETMKVVAQEEIAPAIFELVLEGEMVEAMR-AGQFLHLRVPDDAHLLRRPISISSIDKANKQCHLIYRI--EGAGTAIFSTLSQGDTLDVMGPQGNGFDLSDLDEQNQVLLVGGGIGVPPLLEVAKELHERGVKVVTVLGFANKDAVILKTELAQYGQVF--VTTDDGSYGIKGNVSVVINDLDSQFDAVYSCGAPGMMKYINQTFDDHPRAYLSLESRMACGMGACYACVLKVPESETVSQRVCEDGPVFRTGTVVL
1EP3 Chain:B ((6-255))----EMMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHLAVPNGAMLLRRPISISSWDKRAKTCTILYRIGDETTGTYKLSKLESGAKVDVMGPLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTGCQMTILLGFASENVKILENEFSNLKNVTLKIATDDGSYGTKGHVGMLMNEIDFEVDALYTCGAPAMLKAVAKKYDQLERLYISMESRMACGIGACYACVEHDKEDESHALKVCEDGPVF-------


General information:
TITO was launched using:
RESULT:

Template: 1EP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1364 -33766 -24.76 -137.82
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : -24.76
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_1EP3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EP3-query.scw
PDB file : Tito_Scwrl_1EP3.pdb: