Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSEAIIAKKAELVDVVAEKMKAAASIVVVDARGLTVEQDTVLRRELRGSEVEYKVIKNSILRRAAEKAGLEDLASVFVGPSAVAFSNEDVIAPAKILNDFSKNAEALEIKGGAIEGAVASKEEILALATLPNREGLLSMLLSVLQAPVRNVALAVKAVAESKEDAA
5GAH Chain:I ((8-126))--------KQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYVTEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPASQIDRL---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5GAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 554 -80132 -144.64 -673.38
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain I : 0.72

3D Compatibility (PKB) : -144.64
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.657

(partial model without unconserved sides chains):
PDB file : Tito_5GAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAH-query.scw
PDB file : Tito_Scwrl_5GAH.pdb: