Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLKLLRVDTKVIMGSFFLVLSSLLALLLPLILKGLID----GSSIE---NIGSKVFQSFLIFIGQALFSSIGYYLFSQSGEKKIAKIRKKVIEGLIYAEKSFFDKS
4AYW Chain:A ((58-151))-----------------FLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVNRLRTSLFSSILRQEVAFFDKT


General information:
TITO was launched using:
RESULT:

Template: 4AYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 110 -10316 -93.78 -124.28
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -93.78
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_4AYW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AYW-query.scw
PDB file : Tito_Scwrl_4AYW.pdb: