Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKRDRHQLIKKMITEEKLSTQKEIQDRLEAHNVCVTQTTLSRDLREIGLTKVKKND---MVYYVLVNETEKIDLVEFLSHHLEGVAR--AEFTL---------VLHTKLGEASVLANIVDVNKDEWILGTVAGANTLLVICRDQHVAKLMEDRLLDLMKDK
3ERE Chain:D ((18-156))--RAGRQARIVAILSSAQVRSQNELAALLAAEGIEVTQATLSRDLEELGAVKLRGADGGTGIYVV----PEDGSPVRGVSGGTDRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREP-----------------


General information:
TITO was launched using:
RESULT:

Template: 3ERE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 458 -5762 -12.58 -46.09
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain D : 0.74

3D Compatibility (PKB) : -12.58
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_3ERE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ERE-query.scw
PDB file : Tito_Scwrl_3ERE.pdb: