Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLHFTFLGTSSGVPTLSRNVSGLAVR--NSKNKDWILVDAGEGTQHRIQQARLSLQNLIAICITHVHGDHCYGLVGLLASAGMNARNNPLIVIAPKEIQQWFEITAQLTDLHLPYSIKFIDVNEATRPQQLTDELFIQAHPLSHRVPSFAFSIYIKSTQKKIDIQALTQLGIPKGDIWGHLKRGYDVEFEGRILKSQDFIKIQNQQIHAIIGGDNDRPELLADACKDAQLLIHEATYLQTVLDKVGKGPMHSSAKMVAEFAEQQSLDNLILTHFSPRHQDKTGQQAIIEEVRQFYKGHFYLANDFDEFTLNETGQLLKIE
1Y44 Chain:A ((5-275))-----FLGTGAGIPAKARNVTSVALKLLEERRSVW-LFDCGEATQHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEEGIVFED--DQFIVTAVSVIHGVEAFGYRVQEKDVPGSL-------------------------------------LEPPKKGRSVVFSGDTRVSDKLKELARDCDVMVHEATFAKED-RKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQ-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Y44.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1341 15119 11.27 65.45
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 11.27
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.376

(partial model without unconserved sides chains):
PDB file : Tito_1Y44.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y44-query.scw
PDB file : Tito_Scwrl_1Y44.pdb: