Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPQVKLKEGEPVDVAIRRFKRSCEKAGVLADVRKREFYEKPTQERKRKKAAAVKRYQKKLARESVRTTRLY
5MY1 Chain:U ((4-54))---IKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVK-----------------


General information:
TITO was launched using:
RESULT:

Template: 5MY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain U - contact count / total energy / energy per contact / energy per residue : 40 2449 61.23 48.02
target 2D structure prediction score : 0.29
Monomeric hydrophicity matching model chain U : 0.86

3D Compatibility (PKB) : 61.23
2D Compatibility (Sec. Struct. Predict.) : 0.29
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_5MY1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MY1-query.scw
PDB file : Tito_Scwrl_5MY1.pdb: