Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKFVDDHHLKRKVGTLEMVVAMLLSGSIGLFVIKSGQSPINIVFFRCLISALCLIPICYFYGHFRKVYFGKKELFLMVTSGLLIIFNWVLLFAAFPKTSISLATIVYHVNPFVILFLGALVFHEKLNKNDVLWTIIAFIGLIVIIGLGSASVNSNELVGLGLVLIATTLYSISVLITKKLSNTPPLLIVFIQTLSGAIVMAPFISVFEN-PP-IGQQWLFVVGLGVLHTAFLYYLMYSAIKKIPLNNIAILSFIYPISTIVIDYFFFDHVLTSTQVLGAGLILLGVLGVKLHWNIFAVKKVGIRN
5I20 Chain:E ((3-141))------------------------------------------------------------------------------------------------------------------------------------------------------------RSSATLIGFTAILLWSTLALATSSTGAVPPFLLTALTFTIGGAVGIAAGLARGVGLSVLRQPWP-VWVHGIGGLFGYHFFYFSALKLAPPAEAGLVAYLWPLLIVLFSAFLPGERLRPAHVAGALMGLAGTVVLLGARAG----------


General information:
TITO was launched using:
RESULT:

Template: 5I20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 181 -27158 -150.04 -198.23
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain E : 0.51

3D Compatibility (PKB) : -150.04
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.51
QMean score : -0.001

(partial model without unconserved sides chains):
PDB file : Tito_5I20.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5I20-query.scw
PDB file : Tito_Scwrl_5I20.pdb: