Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAVINGEAEPVYKSERQPKEAVTHESVAKADLKVIDSKSA
4I9K Chain:A ((2-349))----------------------------------------------------------ALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLR---NGDT-----LGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTL--------DVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRK---------VSGEGVQQALLKLIEGT-----------------LQVDTSKILFICGGAFAGLDKVISHRVE------------------EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPL-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 4I9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1439 -203321 -141.29 -701.11
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -141.29
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.633

(partial model without unconserved sides chains):
PDB file : Tito_4I9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4I9K-query.scw
PDB file : Tito_Scwrl_4I9K.pdb: