Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKSVTQENSVPVIGQRFRGFLPVVVDVETAGFNAQTDALLEIACIPIVYDAQGQFVPGPAFHAHINPFEGANLDRRSLDFIGIDPFNPMRIAMAEDERTALRRIFKSVNEVRKQQHCTHAVLVGHNAHFDLGFLQAAIARSGTKNQNPFHSFSVMDTVTLSAVMFGQTVLAKACIQAGIEFDGKEAHSALYDTQKTAELFCYILNKLSPYLLDSLVAAS
3NH2 Chain:A ((33-221))----------------RFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYE--ALHEIFKVVRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLK-RNPFHPFATFDTAALAGLALGQTVLSKACQTAGMDFDS-----ALYDTERTAVLFCEIVNRW------------


General information:
TITO was launched using:
RESULT:

Template: 3NH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 940 -132352 -140.80 -719.30
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -140.80
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_3NH2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NH2-query.scw
PDB file : Tito_Scwrl_3NH2.pdb: