Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRPITAVIHRQALQNNLAVVRKAMPN-SKVFAVVKANAYGHG-IERVYEAFKA-ADGFALLDLEEAKRIRALGWTGPILLLEGVFSPQDLFDCVQYQLSFTIHSEAQIEWVEQH------PYPAQFDVFLKMNSGMSRLGFK----PQHYVQAWERLNNLANVAKITHMMHFSDADGDRFGQQGIDYQITAFEEIVKDLPGERSV---SNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMSLRSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRISPTGTPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGTVGYELMCAVTARVQFINQV
1SFT Chain:A ((16-367))------------AIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVL-GASRPADAALAAQQRIALTVFRS---DWLEEASALYSGPFPIHFH--LKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFS-----YQYTRFLHMLEWLPSRPPLVHCANSAASLRFPDR-TFNMVRFGIAMYGLAPSPGIKPLLPYPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLR-RLQHFHVLVDGQKAPIVGRICMDQCMIRLPG--PLPVGTKVTLIGRQGDEVI-SIDDVARHLETINYEVPCTISYRVPRI---


General information:
TITO was launched using:
RESULT:

Template: 1SFT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1778 -59937 -33.71 -178.38
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -33.71
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_1SFT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SFT-query.scw
PDB file : Tito_Scwrl_1SFT.pdb: