Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSADTQHFTGTDQYIATDSLKLAVKAARALQKPLLVKGEPGTGKTLLAEQVAESLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQLGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEID---KADIEFP-------NDLLHELDKMSFYVYETGETITATQRPIVIITSNNEKELPDAFLRRCFFH---YIEFPDEATMREIISVHFPNISVTLVNEALQVFFKLREIPNLKKPPSTSELIDWLSLLMADDMPEDVLRNRDTSKAIPPLYGALIKNEQDVQLLERLAFMSRR
4Z8X Chain:A ((52-235))-------------------------------KGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGV----GAARVRD-------------------LFETAKKHAPCMIFIDEIDAVGR------DEREQTLNQLLVEMDG-----FDTSDGI------IVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARN-----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Z8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 531 -20758 -39.09 -160.91
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -39.09
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_4Z8X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Z8X-query.scw
PDB file : Tito_Scwrl_4Z8X.pdb: