Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMNKQPQNSALVVVDVQNGFTPGGNLAVADADTIIPTINQLAGCFEN----VVLTQDWHPDNHISFAANHPGKQPFETIELDYGSQVLWPKHCIQGTHDAEFHPDLNIPTAQLIIRKGFHAHIDSYSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKGIDLNGSLEQAWQTMQQQGVIRIQSTDLLNEC
1ILW Chain:A ((3-179))--------EEALIVVDMQRDFMPGGALPVPEGDKIIPKVNEYIRKFKEKGALIVATRDWHPENHISFR--------------ERGGP--WPRHCVQNTPGAEFVVDL--PEDAVIISKATEPDKEAYSGFEGTD------LAKILRGNGVKRVYICGVATEYCVRATALDALKHGFEVYLLRDAVKGIKPEDE-ERALEEMKSRGIKIVQ--------


General information:
TITO was launched using:
RESULT:

Template: 1ILW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 965 -12314 -12.76 -71.18
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -12.76
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_1ILW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ILW-query.scw
PDB file : Tito_Scwrl_1ILW.pdb: