Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLQAVYLTPIELHQTPDWSDRPYNIHRDPLWKTEKQGKEFDDVWFYHCDHLGTPQEMTDHTGAIIWKAEYKAWGECKAEKAKSNFFENSEIISNNIRFQGQYFDEETGLHYNRYRYYSPYVGRFVSKDPIGLLGGSNNYAYAPSPTEWVDPLGLSCQKIPKGFKSFGQLKQFGQAMQAGFSKLGFKGA-TMYMQGSAHSGRSFETGKAFDDGRVSDFDIAVVQPELFEKAKKMGIAKGNRTLPIEINSVEANKLGINGVLQKMSKLAGGRDVNVMIFDSPESAKAKAEGTRIPANCM
1DLJ Chain:A ((236-352))-------------------------------------------------------------------------------------------------IQGISYDDRIGMHYNNPSF--GYGGYSLPKDTKQLLANYNNI-----PQTLIEAI-VSSNNVRKSYIA----KQIINVLKEQESPVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPML-----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1DLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 326 -901 -2.76 -7.77
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -2.76
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.063

(partial model without unconserved sides chains):
PDB file : Tito_1DLJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DLJ-query.scw
PDB file : Tito_Scwrl_1DLJ.pdb: