Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTATALTLACSLLSVMSISQAQAADNIDVSFQTILQQERNWAGLQSKSLKVGDITWSYSEGGSSTKPTLLLIHGLAGSRDNWNRVAHYLTTNYHVIIPDLPGSGETIVSHDFDYSVPNLAEKLRRFVEAANLKGPIHIAGHSLGGSIALLYAGQYPFETKSLFLVDSGGIFRSANTIYLKDLTYLKQLLVSKKGDFNYLLKQTMFNPPFIPREFLQ--AQEKLMINQAPQTQKLVDQLI-----------ALNKVYTPDSFAVLTKTIDAPTLILWGKQDKIINVEVANELKRLLKNAQPPVILENVGHMPILEAEQLVIQQYVPFLLKVETNQSSKTTTP
4UHH Chain:A ((14-274))-----------------------------------------------------GEIELAFEDTGTGLP--VLLVHGFPLDRTMWKAQREELCDEFRVIVPDLRGFGESQVIPGV-ATMEAMADDLAGLCNHLGLTGKIVLGGLSMGGYVAFAFARKYRDRLAGLILCDTRARPDSPE---------------AKENRRRVAERVRREGPGFIAEEMIPRLCCESTFRNH-PEVIEKIRQMILSAPPEGVAAAALGMAERPDSTDLL-PALSCPTLVLVGQFDAISPPEEMEAMARTIPQSQ-FVVIPDAGHLPPMEQPERVTQAIREWLRKVHTE--------


General information:
TITO was launched using:
RESULT:

Template: 4UHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1468 -74426 -50.70 -300.10
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -50.70
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_4UHH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UHH-query.scw
PDB file : Tito_Scwrl_4UHH.pdb: