Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRPDSKSMNYQLLKTFSRQPIQFGRFLARLLAGLVNTLKITRTSKSIELNLRIALPYLTPQQRIAITEKAVRNELTSYF----EFLSIWGSSNSKNISRIHRIEGEHFFHEALAAKKGVVLIVPHFGTWEVMNAWCAQ----FTSMTILYKPVKNADADRFV--REARSREQANLVPTDESGVRQIFKALKQGETTVILPDHTPNVGGDMVNYFGVPLASSNLSAKLIQKTKAKALFLYAIRNENDGFTIHIEP-MDEKIYEGTADDGTYVIHQAIEQLIYQYPEHYHWSYKRFKANPALDNIYNIDPTEALKIVDRLKAEALKTSTQPEPIQTSVM
5F2Z Chain:A ((64-280))------------------------------------------------------------------VPDDLIRASLASYARYWREAFRLPAMDHGRLGEQLDVIDIDHLW-SALDAGRGAVLALPHSGNWDMAGVWLVQNYGPFTTVAERLKP--ESLYRRFVEYRESLGFEVLPLTGGERPPFEVLAERLTDNRPICLMAERDLTRSGVQVDFFGEATRMPAGPAKLAIETGA-ALFPVHCWFEGDGWGMRVYPELDTSSGDVTAI--TQALADRFAANIATYPADWH-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5F2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 919 8534 9.29 41.42
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 9.29
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_5F2Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5F2Z-query.scw
PDB file : Tito_Scwrl_5F2Z.pdb: