Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAFRNNVPQASWRLAKIALGGIVLTGLAVGTYAYAQQKPLPTV-DKVELDRYLGVWYEVARKPAFFQK-KCAYNVSATYTLNENGNIVVDNRCYDNQKQLQQSISEAFVVNPPYNTKLKVSFLPEAVRWIPIIRGDYWILKLDED-----YQTVLVGEPSRKYLWVLSRTPHPHKEVVDEYLNYAKTLGFDIRDIIHTEYKE
5EZ2 Chain:A ((9-158))--------------------------------------PKPAVQEDFDAARYLGVWYDIQRLPNKFQKGECA---TATYSLSPGVGFSVFNRERLANGTIKSVIGSAIAEDPCEPAKLQ--FFHENAAPVP-----YWVLSTDYDNYALVYSCINLGASHAAYASIVSRQPTLPEETIKKLQGTMSSFGVGVDTLLTT----


General information:
TITO was launched using:
RESULT:

Template: 5EZ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 646 5199 8.05 36.35
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 8.05
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_5EZ2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EZ2-query.scw
PDB file : Tito_Scwrl_5EZ2.pdb: