Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMYKMTRRSTMLETYLEKSIFRQVYICEQLHEKGTIQIREIADQLNVCPLTVTNDLECITDILHQQIISVEKSRSSFTVAFDSSFSRLALTQLIYQRSDFFNVLGHYLSGEHNWSNIADTTFISLSKVYNLRNELINFFKQMQYLNADGHFEIPEKDYRSLLLTIIYETNRTELIQLNKSIIQSGQQLIDYVEKHFFSRSYPTVEKQFILLGIAIGLQRSKTNPIYFSQEEKRVARHTPLFQLIQKGLEQLSFSLCHDEDECLYIYFLFNSRNYLCDNFELLQKDLNVVYQNHVADNPLVIELSQKLILSLNISEENQILFDKALLPFIRSLWADIQIFQPDKTYLLNEEQRALYLEVHEILEQWRKQNNL--FLR-WNENSIRKLTISLSLLNEHKRKSPIEVFIVAPSDFRYLYYRQQLEDILGEHFSISNIICKQLREIVDDTFFCTQRIILCDSSLYQEGLGSEKTIIYPITFQTIHTVIDQLNKQI
5HDK Chain:A ((31-104))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QNGQSFLVLDEQRF----AKEILPKYFKHNNMASFVRQLNMYGFRKVVHI----------GPVE--------FQHPYFKQGQDDLL------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5HDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 158 -3604 -22.81 -59.07
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -22.81
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_5HDK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HDK-query.scw
PDB file : Tito_Scwrl_5HDK.pdb: