Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMQGVIAMMSKNNTNGRNQFAMLTIDDLVPQDHLVRKIDAALDFEFIYPIVEATYSDLGRPSIDPVILIKLVFIQYLFGIRSMRQTIKEVDTNVAYRWFLGYSFEEKIPHFSTFGKNYVRRFRETTVFEDIFAYILEQAVKAGFVTEDNLYLDSTHIKANANKHKFTKEMTHDEAKAYQDELEDEINRQRIEAGKRPFTLDLEKEVKLKERKISKADPESGYYVKGEREKQFAYSAHTSCDDNGFILSTIITPGNIYDSQVAFQLVKQSKRLFPEINCVVADAGYKTPKFVHFLTHLNLRPCLPYSRPKGKKGLLSKNEFLYDEYFDCYICPQDQMLAFSTVTREGYREYKSNPKECVNCPLLNQCTISKNHQRVITRHVWGDLMDEVEHLRLTDLNKSIYKKRKQTIERIFADAKEKHGMRWTKYRGLEKVATHTMLVFAAMNLKKLATWLWKGKEPLFFCSKIRNEVDKKLFQARVTSLEQLLSTV
2JK3 Chain:A ((3-59))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------REQTMENILKAAKKKFGERGYEGTSIQEIAKEAKVNVA------MASYYFNGKENLYY---------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 165 -18358 -111.26 -353.03
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -111.26
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.401

(partial model without unconserved sides chains):
PDB file : Tito_2JK3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JK3-query.scw
PDB file : Tito_Scwrl_2JK3.pdb: