Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKILFVCLGNICRSPMAEGLLRKRIALEGREAEFFVDSAATSTYEVGKTPHPGTKKILNQEKVDMTNMVARQITPHDFETFDWIIGMDQENVEELKRRA--PRSAQGKIHLFLSSIPGKEKENVPDPYYTNNFDETYHLITEGLNHWWNIWIDENKITNNL
5JNU Chain:A ((11-140))---VLFVCLGNICRSPIAEAVFRKLVTDEKVSDNWRIDSAATSTYEVGNPPDYRGQNCMRKHGIHMQH-IARQITKEDFATFDYILCMDESNLRDLNRKSNQVKNCKAKIELLGSYDPQKQLI-IEDPYYGNDSD---------------------------


General information:
TITO was launched using:
RESULT:

Template: 5JNU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 601 -46328 -77.08 -361.93
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -77.08
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_5JNU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JNU-query.scw
PDB file : Tito_Scwrl_5JNU.pdb: