Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRFASKEEEKLYYEHKASEEEFLNWYQKQERPEYDKPSLTVDIVLMCYNKEEDQLKVLLIQRKGHPYRNSWALPGGFVQK--DESTGESVLRETKEETGVVISKENIEQLHTFSTPNRDPRGWVVTVSYLAFIGEEPL-IAGDDAKEVRWFTLERHSNKIHLSSGEVAISLDLVTGESSGKDTLAFDHSQIILKAFNRVVNKMEHEPQVLQVLGKDFTITEARKVFAKFLGIDYKTIDHSNFKKAMLQYFDEIGERPVGIGRPSKIYQLKPGHHE
3GZ8 Chain:A ((23-157))---------------------------------------LTVDAVLFTYHDQ--QLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVV--PPYIEQLCTVGNNSRDARGWSVTVCYTALMSYQACQIQIASVSDVKWWPL---ADVLQMP--------------------LAFDHLQLIEQARERLT---------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 666 -38800 -58.26 -293.94
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -58.26
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.368

(partial model without unconserved sides chains):
PDB file : Tito_3GZ8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GZ8-query.scw
PDB file : Tito_Scwrl_3GZ8.pdb: