Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASILLIGFMGAGKTTIGKGLAQCLQKEYVDLDTKIEEHIQLSIAEYFHYYGEKSFRKVESDILR-KLSNEDKIIATGGGIVQSAENRRFLKTQPIVLYLEAEADCLVDRIQQDETSIRPLALGKTR-EEIKALLAQRLSWYEESATHRINTTNQTPEKIIDTIIERIKSI
2IYT Chain:A ((6-167))----VLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVV-YLEISAAEGVRRTGGN--TVRPLLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ--


General information:
TITO was launched using:
RESULT:

Template: 2IYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 672 -4414 -6.57 -27.59
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -6.57
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.679

(partial model without unconserved sides chains):
PDB file : Tito_2IYT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IYT-query.scw
PDB file : Tito_Scwrl_2IYT.pdb: