Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLLVKQELFKLIKKKSTAVLSVLLVVLLIGTALLAKKYTTIIDPVEMTAQLFSATSWIVFI--MIAAASTIISMEAQYGTLKNLLYRKY-SRGEILVSKWITLVIYSVYLYLLAIIVTVLMKLILFPSISFTEKVSTGQTLIQSLFTYTLGSYIGLWLILSLVLMIACFINSSGASISAGIVFYFASSIISGILIALIQKWEW----IKWNPISMLNLQ-NQIGNEEI-MK-------------------QLTHLSTNQMLFGNLAYIVLFLALGYLVFKRKNV
5DO7 Chain:B ((402-668))-TTLIRRQISNDFRDLPTLLIHGAEACLMSMTIGFLYFGHG-SIQLSFMDTA-ALLFMIGALIPFNVILDVISKCYSERAMLYYELEDGLYTTGPYFFAKILGELPEHCAYIIIYGMPTYWL----AN-LRP---------GLQPFLLHFLLVWLVVFCCRIMALAAAALLPTFHMASFFSNALYNSFYLAGGFMINLSSLWTVPAWISKVSFLRWCFEGLMKIQFSRRTYKMPLGNLTIAVSGDKILSVMELDSYPLYAIYLIVIGLSGGFMVLYYVSLRFIK-


General information:
TITO was launched using:
RESULT:

Template: 5DO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 996 -155047 -155.67 -648.73
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : -155.67
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.298

(partial model without unconserved sides chains):
PDB file : Tito_5DO7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DO7-query.scw
PDB file : Tito_Scwrl_5DO7.pdb: