Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSRYQCSLCQLETLENDLNFCVCCRAAVCAKCTLACYPNRKSVGLCVRCTPPDYGFACGRCRRHISYGDIEFFCDMCAVPICFTCVASGTSFECGQLKCSLCCECPMSQAPRNLVVRHEVDDAMLRQLPIPLVSSATPLAAPPPQARAAAAAVAATKSTKYRKLFGREKLGEGAQGVVYKCHT------EENEVVVVKEMVFNDTDVTAFEAQARQVERMRQLNHPHLIRYLDVSVQKDPLRICVVMPFYSEGDLKKFIERQR---KPVTEVKLCSIVLQIAGALNYLHRQEPPLVHRDIKPENILLLNHEEQVLLMDLDLCRTVDVTASVIKRRELSPTYEYRAPELEKS-HGDTKADVFSLGVVMFVLATLPDFPCVRTDSGEMLVFSASKWSPSSLKRAIQREIRRVQRYTYSEEFIRLVVAMLVHQPAARPTSGAVIYRLQKIMEQRLMEGKE
5AMN Chain:A ((27-297))---------------------------------------------------------------------------------------------------------------------------------------------------------------------LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD--GPLLLIVEYAKYGSLRGFLRESRKVERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAE-GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL-------------FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV--------


General information:
TITO was launched using:
RESULT:

Template: 5AMN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1229 20052 16.32 78.63
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 16.32
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.491

(partial model without unconserved sides chains):
PDB file : Tito_5AMN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AMN-query.scw
PDB file : Tito_Scwrl_5AMN.pdb: