Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIMFVRKRNSALFTVILLGSILSGCQVVNVKQQALNVTIANERNSILTQGKLSEASLNVLSMSGQEAKACTDSPDTCVNQLKNLPQILDEQLLSAASEMYLAKAMALSDSSECKISRFTKHKPTEEQKVIQNKYDECLDQQLSLLDKSIRYSYAYLFSTKRQPTDRIFDNRQVQIRDFYNQAIAKMVSVYDLRYPQKNVVEPQIHIGKSVYSIDFEFHRQLSGQKLEKLISSYNLNFSGLRTINRRDGFGSEFVAVFPSSGKEDINEYILDPLNYSYKNGVNPNIHHARYLAATIVAEPKHAKTIQEIINDPEFVIRVYDPYRTDNINVAGKQYPLATNFSAPYGLWLAENNLGVAAYLSLIDRDQHLTMPHLYMLEPYNPNKKIIVLVHGLASSPEAWIALTNDVMGDTVLRDNYQVWQVFYSTNMPI------LESRFQIYALLKQAFGSLNPSDPAAHDAVLVGHSMGGIISRLLVSDADITKPALEMMTIRQQNRFKKHPMVTERLQMHSISNFDRTIFLASPHRGTDYADRWFTLAARKIIRLPGAFLSAVTTSLTTENLDIKDFLNNIDNGLIQNGPSDLSHQSKFMELTENINPHQGLIFHSIMGNITKSDDPNVITDGIVPYKSAHLEGAKSEKVLPGGHSIQLTPQAVLELRRILREHLVEHGLYKP
5A62 Chain:A ((20-112))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DARSYPLVLIHPIGGNILIWDYEIQLLL-----KSGFRVIAYELRGHHRTNMGKTGAYTMQDLIDDLRRLLEHLN-----IGKCTIIGHSIGGIISSMYAAQH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5A62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 307 -39263 -127.89 -451.29
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -127.89
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_5A62.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5A62-query.scw
PDB file : Tito_Scwrl_5A62.pdb: