Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFNCDLVWMNSMSALLRFTQFVQKTFALWVIIFAALALWQPEFFVWLKAYIPWILGIIMLGMGMTMTVDDFKGVLQSPKAVLIGVVAQFVVMPGLAFILCKLFNLPPEIAVGVILVGCCPGGTASNVITYMAKGNVALSVACTSVSTLLAPVLTPAIFYLLASQWLKIDAASMFISILQVVLLPIVIGLILRTWLKRQVESYIQVMPLVSVIAIVAIVAAIIGGSKAAILQSGLLILAVVILHNGLGYLLGFAAARFFKLPYADSKAIAVEVGMQNSGLGVALAAVHFAASPITAVPSAIFSLWHNISGPALATYWASKHKQE
4N7W Chain:A ((80-108))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WILAMLFRMPPDLSAGMVLVGSVASGTAS-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4N7W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 37 -6892 -186.26 -237.64
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.37

3D Compatibility (PKB) : -186.26
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.37
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_4N7W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N7W-query.scw
PDB file : Tito_Scwrl_4N7W.pdb: