Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPIEFIATSKLPTAFGEFNISVFQDPVTGEEHVALSKGLENPPTDPVLVRVHSECLTGDAFASLKCDCGPQLQATQKLINEAGQGVILYLRQEGRGIGLTNKIRAYALQDQGHDTVDANLLLNLPADARRYDMCSIMLDHLKVKEVKLITNNPLKIQALKDQGINVVDRVPLTVGRNPFNEQYLKTKRERMAHLYQKDDF
1Y9W Chain:A ((94-125))-------------------------------------------------------------------------------------------------------------------------------------------EKGCRLILLDSFSFQAPEFYKKHGYREYGVVE-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Y9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 40 -4338 -108.44 -135.55
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -108.44
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.671

(partial model without unconserved sides chains):
PDB file : Tito_1Y9W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y9W-query.scw
PDB file : Tito_Scwrl_1Y9W.pdb: