Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKVNKTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKYDSGCGWPSFFRPLNGSVIDEHEDLTHGMVRTEIVCHDCEAHLGHVFEDGPQP-TGLRYCVNSASLQLKTQEKNDEGTYP
3E0M Chain:D ((169-305))---EKPSQEVLKASLSEESYRVTQEAATEAPFTNAYDQTFEEGIYVDITTGEPLFFAKDKFASGCGWPSFSRPLSKELIHYYKDLSHGMERIEVRSRSGSAHLGHVFTDGPRELGGLRYCINSASLRFVAKDEMEKAGYG


General information:
TITO was launched using:
RESULT:

Template: 3E0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 680 -22214 -32.67 -163.34
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain D : 0.82

3D Compatibility (PKB) : -32.67
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_3E0M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E0M-query.scw
PDB file : Tito_Scwrl_3E0M.pdb: