Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRQLQLDIEPQLDARISDFSGPGWGHVVDAVRQLHAGL-VNRFYIYGGAGTGKSHLLSAICDSYLEVGKSAIKVS--LLELL--DAP----IEAITC----LEHYDLVALDDIESISGVPHWQKAVFHLMN--NHEGQLVFSSRVAPIELKLELPDLQSRLTQAVSVKVPSGSLYADRYALVTSVMARRGIHFDQQIVDYLLLHGPHQASVLLQTVAQLEKLLKGEKTKLSNATLRQIYALIDEYQQ
2CHG Chain:A ((14-223))-------------RTLDEVV-G-QDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERGIDVVRHKIKEFARTAPIGGAPFKIIFLDEADAL--TADAQAALRRTMEMYSKSCRFILSCNYVSRI----IEPIQSRC---AVFRFKPVP-KEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIG----EVVDADTIYQIT--------


General information:
TITO was launched using:
RESULT:

Template: 2CHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 859 -20920 -24.35 -107.28
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -24.35
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_2CHG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CHG-query.scw
PDB file : Tito_Scwrl_2CHG.pdb: