Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVHFLHTSDWHLGQFFYNHSRHYEHQQFLSWLLTQIQEKQPHALLIAGDIFDVINPGSQAQKQLYQFLADAHR-------------------------IAPHMQTLMIAGNHDSGYRIEQ--VEPLLEKY-NAKTVGVVRWNEDKTLDLDRLLLPIYNQNQDIVAWCLALPFLRSAEITGFNEHTTNSKNAIAYLHQQLIAEAKRRKTPDQALILMSH-AHMQGGETSDSERPIIIGNEEALSTTLFEDAVDYVALGHLHKPQKVG-Q-----PHIRYSGSPIPLSFSE--INYKHQVVEVKIDPSQDIDSRLQFEAVEIPRCIQLHRIRGELNEVLQQLKALPHGVIENIDHREYVDIEYYSLTPPQPNLRQQFEAALPPDRYRLVRISRQYVNKDTTNSNTTQHIALEPPTPEKLFQNIWEKQGYSADDAVLKDFLSLVQEAQKHLENDASH
3T1I Chain:D ((32-335))-TFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPNLNI-SIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVE--KIDISPVLL--Q--KGSTKIALYGLGSIPDERLYRMFVN------KKVTMLRP-KED-----ENSWFNLFVIHQNRSKHG---ST---------NFIPEQFLDDFIDLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVK-KHVGLLRIKGRK-----MNMHKIPLHTVRQFFMEDIVLA------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3T1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1393 -70246 -50.43 -270.18
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain D : 0.64

3D Compatibility (PKB) : -50.43
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.414

(partial model without unconserved sides chains):
PDB file : Tito_3T1I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3T1I-query.scw
PDB file : Tito_Scwrl_3T1I.pdb: