Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKATQSKAWTTVQIARHPERPQ-FLDYVGEIFTE--FDALHGDRLFGDDGAMVGGLARFDGQPVMVIGQHRGRSTREKLKHNFGMCNPEGYRKSQRLLDMAERFNLPVFTFIDTMGAYPGVGAEERGQAEAIATSLAQLSSLKVPVIATVLGEGGSGGALGIG----VADRVIMLSHSIYSVISPEGCASILWKTAEKAA---------QASEA--LGLTADKLQSLGIVEYVVDEGEGAHLDPERVMQNLKVVLKQALDELLPMDANERCEARYQRLMKFGSENLGMAS
1ON3 Chain:E ((284-509))----------------IDGKKGYDVRDVIAKIVDWGDYLEVKAG--YA--TNLVTAFARVNGRSVGIVANQP--------SVMSGCLDINASDKAAEFVNFCDSFNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVID-P-----------ADTRRKIASALEMYATK-------------------------


General information:
TITO was launched using:
RESULT:

Template: 1ON3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1074 -12254 -11.41 -58.91
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain E : 0.73

3D Compatibility (PKB) : -11.41
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.542

(partial model without unconserved sides chains):
PDB file : Tito_1ON3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ON3-query.scw
PDB file : Tito_Scwrl_1ON3.pdb: