Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCYSFSNSKAKGDVMKRTRVLYLEVADKIKEDIFSGKYPVGSMLPTESELEELFQVSKITVRKAIELLASDEYVAKKSGRGTTVLSNRPY--NRLSKAASFTQILENSRYEVRKETLDLQLVHIKKEDP-LFSF-FGEQAVCFKRLYYLNNQPYIYFVHYLPQEMMQFSREEFGKESLYRLLT-KKGYTIDSFSDDFSAVFLTEEEQGILKTDAQ-IGIKRIRKSSTQIGEMIEYSEAVYHTELHPYHIDYET
3BWG Chain:C ((6-234))--------------------KYQQIATEIETYIEEHQLQQGDKLPVLETLMAQFEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKRKGYISLLS-------LED--FNVTSKVIELDVRKPTPEAAENLNIGMDEDIYYVKRVRYINGQTLCYEESYYTKSIVTYLNNEIVSHSIFHYIREGLGLKIGFSDLFLHVGQLNEEEAEYLGLEAGLPKLYIESIFHLTNGQPFDYSKISYNYEQSQFVVQA--


General information:
TITO was launched using:
RESULT:

Template: 3BWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 933 -28594 -30.65 -132.38
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain C : 0.67

3D Compatibility (PKB) : -30.65
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.355

(partial model without unconserved sides chains):
PDB file : Tito_3BWG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BWG-query.scw
PDB file : Tito_Scwrl_3BWG.pdb: