Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMASLQSRLAPITNINNNAYTTTAGAPILRKPEMTSAASAVYISRKEAAVSSSHGAPTNKMMATAAVTGSSRCEEATGRRSGSKRDHETSVTTDQNPQDAAKSLPPPPKKKKVTYALPHQNMEEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVESWD-RKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNDSGHMCIVMPKYGPCLLDWIMKHG--PFNHRHLAQIVFQTGVALDYFHSELHLMHTDLKPENILMETSDTTVD--PAT-NRHLPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVILGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAARCGTEEARLLYNSAGQLRPCTDPKHLARIAR-AR-----TVRDVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPEARQAPSYPDNRAMLRPPPIM
5J1W Chain:A ((13-336))-----------------------------------------------------------------------------------------------------------------------------------------SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH-GHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRK---RKYFHH-DRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK----------------------


General information:
TITO was launched using:
RESULT:

Template: 5J1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1522 -47369 -31.12 -151.82
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -31.12
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_5J1W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J1W-query.scw
PDB file : Tito_Scwrl_5J1W.pdb: