Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -------------MKKYQRMHLIFIRQYIKQIMEYKVDFVVGV-LGVFLAQGLNLLFLNVIFQH---IPFLEGWTFQE-----IAFIYGFSLIPKGMDHL--------------FFDNLWAL--GQR--LVRKGEFDKYLTRP-----INPLFHILVETFQIDALG---------ELLVGGILL-GTTVTSIVWTLPKFLLFLVCIPFATLIYTSLKIATASIAFWTKQSGAMIY---IFYMFNDFAKYPISIYNSLLRWLISFIVPFAFTAYYPASYFLQEKDVFFNVGGLMLISLVFFVISLKLWDKGLDSYESAGS 5B46 Chain:B ((4-304)) RKPVFVDWCPGCGDFGILRAEEMAIREL--GINPKSVVIVSGIGCSGKIPHFMNLPISGVHTLHGRSIAFATGIKLSNPSLEVIVNVGDGDGLGIGMGHFVHLGRRNIDIAVLVHNNGVYGLTKGQASPTLHRGEKTKSLPKPNIMDAVNPLAVALAAGYTFVARGYAYDVMHLKELIKKAILHKGSALVDILQPCPTYNDINTKEWYDKRVYKLDNVPGWDPVVRKEEEAQKKFEQAIMKSYEWGEKIPIGIFYQNEL-VPTFEDRLTSNIPNYREYYPAKQQI--EING----------ISTTKIDELIKAKRI---

General information: TITO was launched using: RESULT: Template: 5B46.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1379 -69626 -50.49 -286.52 target 2D structure prediction score : 0.32 Monomeric hydrophicity matching model chain B : 0.62 3D Compatibility (PKB) : -50.49 2D Compatibility (Sec. Struct. Predict.) : 0.32 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.129

(partial model without unconserved sides chains): PDB file : Tito_5B46.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5B46-query.scw PDB file : Tito_Scwrl_5B46.pdb: