Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLNKYIDHTLLKQDAKKKQIDSLLSEAREY--GFASVCVNPTWVEHAKKGL--EGT-DVKVCTVVGFPLGATTSAVKAFETKEAIQNGADEIDMVINVGALKSGN----LALVESDIRAVVEASGDKLVKVIIEACLLTDQEKIV-VCQLAQKAGADFVKTSTGFSTGGATIADVTLMRETVGSDMGVK------AAGGARSYADALAFVEAGATRIGTSAGVAILKGELADGDY
1JCJ Chain:B ((14-217))----KLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKA--CKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVI-RDMGVEKTVGFLPAGGVRTAEDAQKYL-------------------------


General information:
TITO was launched using:
RESULT:

Template: 1JCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 984 4439 4.51 23.61
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : 4.51
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_1JCJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JCJ-query.scw
PDB file : Tito_Scwrl_1JCJ.pdb: