Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKRNNSQNLIMLKHDFASHIEDLKCATKPRSEALGRHLWTCTI---------DADFYWLKFHLPNVHAQSEQDFLHELQFYEDI-TYKKANWLLPFKIIEGRTISQQTQFQGKVLV--LPDTECWFDDLDQ-------KQNLKNINEKIYLALVKLAELHELGWIHGDIKKEHFRKFK-QELYLIDFEKTRLISSP-----DPITDATPRYMAPELFHGANKTVQSDLYALGIVLYEWLT-QTRLQANSYHEWAVLHC-QKLNVELPSSF-QIFLPLLSGLLQKQQQNRFSNVHEAINCLKALST
2PSQ Chain:A ((72-362))------------EDPKWEFPRDKLTLGKPLGEGCFGQ-VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ--------DGPLYVIVEYASKGNLREYLRARRPPPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT-FKQLVEDLDRI--


General information:
TITO was launched using:
RESULT:

Template: 2PSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1169 -8412 -7.20 -33.38
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -7.20
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_2PSQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PSQ-query.scw
PDB file : Tito_Scwrl_2PSQ.pdb: