Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MKKPVPKIYR--TTNWSSYNQALIKR--------GNISIWFDPKTQWYAQPQGKHGRNQT---------YSDAAIQCCLMIKSLFRLSLRMVTGFAQSLIKLCGLNWTAPDYSTLCRRQKRID--IAISYQQSRDGLHLLVDSTGLKFLGE----GEWKRKKHQPAYRRQWRKLHIGIDAKTLQIRAVQLTTNNVS--DSQVLGDLLDQIPLDERIDSVYTDGAYDTKHCRQV-ILDRDAHAVIPPRKNAKPWKDKK-------------------LRSLARNELLKTVKRLGRSLWKKWSGYHRRSLVETKMHCIK
1L9V Chain:A ((1-313))MAELACFCYPHLENDSYKFIPFNNLAIKAMLTAKVDKKDMDKFYDSIIYGIAPPPQFKKRYNTNDNSRGMNFETIMFTKVAMLICEALN----SLKVTQANVSNVLSRVVSIRHLENLVIRKENPQDILFHSKDLLLKSTLIAIGQSKEIETTITAEGGEIVFQNAAFTMWKLTYLEHQLMPILDQNFIEYKVTLNEDKPISDVHVKELVAELRWQYNKFAVITHG---KGHYRIVKYSSVANHADRVYATFKSNVKTGVNNDFNLLDQRIIWQNWYAFTSSMKQGNTLDVCKRLLFQKMKPEKNPFKGLSTDRKMDEVS


General information:
TITO was launched using:
RESULT:

Template: 1L9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1195 17502 14.65 66.55
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 14.65
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.186

(partial model without unconserved sides chains):
PDB file : Tito_1L9V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L9V-query.scw
PDB file : Tito_Scwrl_1L9V.pdb: