Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKHSILISGAAQGIGAEIARVFYQRGYKVGIYDINESLAQNLAQEL---GPNACAGYLDVSDYSQWQHILKEFTDWAGELNILVNNAGILYSGAFENID----IKSHQR-----TININVNGVINGCHAALPYLKQASFARVINLSSASAIYRQADLISYSASKFAVRGITEGLDVEWKKYGIRVLDVMPLFVQTAMVNNMDAGSIQNM------GVDLTPNDIAQQVLSLV---EGFVAQTF
4NBW Chain:D ((5-245))-KRVAIITGAANGIGRATALEFAQAGYHVVAWDLAEEAGAALIAEIADAGGSADFARVDVSAAESVEAAVAEIIAEHGRVDVLVNNAGILHDGQLVKVKGGEVVKKMAEAQFDAVISVNLKGVFLCTQAVAPHMIAAKYGRILNASSVVGLYGNFGQTNYVAAKSGVIGMTKVWARELGRYGITVNAIAPGFIATEMVQQMPERVLEAMVARTPVGRIGDPVDIARAYLFLASEESGFISGT-


General information:
TITO was launched using:
RESULT:

Template: 4NBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1087 -73172 -67.32 -332.60
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain D : 0.74

3D Compatibility (PKB) : -67.32
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.381

(partial model without unconserved sides chains):
PDB file : Tito_4NBW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NBW-query.scw
PDB file : Tito_Scwrl_4NBW.pdb: