Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSAVVVSSENLDGQQQSSSTPASPAAEKVNLLGMSRAELEKFFEDIGEKKFRAGQVMKWIHQYFVTDFAEMTNISGKLRAKLEQICEIKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPDEIIGQLWMANYSYMEEVPVAERERSVTNVVMMGMGEPLLNYDAVLSSMHIMLDDFAYGMSKRRVTLSTSGVVPK--IDQLAKDIDVALAISLHAPNDELRNELVPINKKYPLAQLIAACQRYIAKDGNESARKHVTIEYVMLEGVNDQPEHAQQLLKLLKNLP---SKINLIPFNPFPHAPY--GRSSRNRIISFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWQKKVAQRQEILRTQG
3CAN Chain:A ((7-183))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGVTFCG-GEPLLHPEFLIDILKRCGQ-QGI-----HRAVDTTLLARKETVDEVMRNCE-LLLIDLKSMDSTVHQTFCDV----PNELILKNIRRVAEA------DFPYYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIINLLPYHD------KMQTPSEEVQQQCIQILTDYGLKATI--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CAN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 667 -6536 -9.80 -43.00
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -9.80
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.544

(partial model without unconserved sides chains):
PDB file : Tito_3CAN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CAN-query.scw
PDB file : Tito_Scwrl_3CAN.pdb: