Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEICPRTR
5V6D Chain:D ((10-149))-AIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTLKEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPTEAAEGTIRADFATSVSINAVHGSDSVENAALEIAYFFSQTEICPR--


General information:
TITO was launched using:
RESULT:

Template: 5V6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 662 -56252 -84.97 -401.80
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain D : 0.90

3D Compatibility (PKB) : -84.97
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.467

(partial model without unconserved sides chains):
PDB file : Tito_5V6D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5V6D-query.scw
PDB file : Tito_Scwrl_5V6D.pdb: