Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHPIVIIGSGMAGYTLAREFRKLNPEQELVMICADDAVNYAKPTLSNAFAGKKAPEQIPLGDAAKMSAQLNMRIEPFTWVKEILAERHELVLEKDGIISQQPYSKLILAVGANPIRLAIAGDGSDDIHVVNSLIDYRSFRENLAQRKDKRVVILGAGLIGCEFANDLLHSEYDVTVIDLAPQPLGRLLPSHIASAFQQNLEEAGVKFTLGTTVEKVSKINNGEDYAVTLANGQTLVADIVLSAIGLQPNISLAQSANIQT--SRGVITNSLLETNQADIYAIGDCAEVNGTL------LPYVMPIMQQARALAKTLSGQQTNVHYPAMPVAVKTPAAPLTVLPAPVDVDVNW-------ETE-----EFDDGM-LAKAIDNEGTLRGFVLLGATAGKQRLTLTKLVPDLIPAQA
3OC4 Chain:B ((2-404))SLKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSG--------------AR-YITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKF------AVPLLEN--SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEET-A-NGIVLE-TSEQEISCDSGIFALNLHPQLAYLDK-KIQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTMGTKVGDYYLASTGLTETEGLFFPQTLASIIVRQPAPPHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSI-------


General information:
TITO was launched using:
RESULT:

Template: 3OC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1989 -172099 -86.53 -479.38
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -86.53
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_3OC4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OC4-query.scw
PDB file : Tito_Scwrl_3OC4.pdb: