Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATTNQLIRKGRTTLVEKSKVPALKACPQRRGVCTRVYTTTPKKPNSAMRKVCRVRLTSGFEVSSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSLDCAGVKDRNQSRSKYGAKRPKK
2UUA Chain:L ((5-121))-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYG------


General information:
TITO was launched using:
RESULT:

Template: 2UUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 482 -28010 -58.11 -239.40
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain L : 0.93

3D Compatibility (PKB) : -58.11
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.585

(partial model without unconserved sides chains):
PDB file : Tito_2UUA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2UUA-query.scw
PDB file : Tito_Scwrl_2UUA.pdb: