Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLLLSIAQLAKSTYYYWVKKLDKPDKYSKIKQEITAI-----VKESRNSYGYRRVTLALKMKGYTINHKTVRKLMSQMGLTCQIRIKRYKSYKGTVGKIAKNVLKRNFSVDTPNKKWVTDVTEFKI-----KGRKIYLSPYT
5HI8 Chain:A ((1-136))NSMIDKFCDWFEGEFDNWTQAASNPTKWAHIIVKHEKISEYKYHTSSRYSYMDKPYREQTVDIEYVCPELIIVH-----NPACDIIFKWTGIY--FEGESEPDCQWNGQPLDSKARLYADEYHTWDVGYWEGSEGFFHFKKNV


General information:
TITO was launched using:
RESULT:

Template: 5HI8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 499 3942 7.90 31.28
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 7.90
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.132

(partial model without unconserved sides chains):
PDB file : Tito_5HI8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HI8-query.scw
PDB file : Tito_Scwrl_5HI8.pdb: