Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MIYKGTLLYKPEECSHCLCVVPSRIIRWG--TTTVRLLLNDVSEYRTYLELKKQRFKCKSCQRTFVADTSVAEKHCFISQKVRWSVIARLKENTSMTEIARQKNISTSSVYRVMKRFYRPLNPFKQTLPKVLCFDEFKSVRSVASAMSFIMMDGQSHALLDIVENRRLPYLERYFSRFSLATREAVQLIVIDMYAPYVSLVKKLFPNAQLIIDRFHIVQHIGRTFLNHR-VKETTVRLKGNSHSQRGLGKN
5E4B Chain:A ((34-209))EQFQLRGVLW--------------GKAYSWKITGTTIDKVWSIVGD---YVRVDN-----------------------WVSSVVKSSHVVSGEANQT----------------GCVRRFVC--YPASEGESETVDYSELIHMNAAAHQYMYMIVGG------NI---TGFSLMKNYVSNISLSSLPEEDGGGVIFYWSFTAEPASNLTEQKCIEIVFPLYTTALKDLCTHLSIPESSVTLLDD----------


General information:
TITO was launched using:
RESULT:

Template: 5E4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 783 -11076 -14.14 -64.77
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -14.14
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.270

(partial model without unconserved sides chains):
PDB file : Tito_5E4B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5E4B-query.scw
PDB file : Tito_Scwrl_5E4B.pdb: