Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHIELKNKIVFVTGVAGFIGSNLTKRLFADIEGVKVVGIDNMNDYYDVRLKEARLEELFKFENFVFVKGNLADKAVITAIFEEHHPNIVVNLGAQAGVRYSIINPDAYIEGNMIGFYNILEACRHYP-VEHLVYASSSSVYGSNKKIPY---------------STDDKVDNPVSLYAATKKSNELMTHAYSKLYNIPSTGLRFFTVYGPAGRPD---MAYFGFTNKLL---K--GETIQIFNYGNCKRDFTYIDDIVEGVIRIMQGAPEKQTGEDGLPVPPYAVYNIGNHN--PENLLDFVQILLEELIRAGVLPEDYDFEAHKELVPMQPGDVPVTYADTEALERDYGFKPATPLRTGLRKFAEWYKEFYMSETV
1ORR Chain:B ((2-339))--------AKLLITGGCGFLGSNLASFALS--QGIDLIVFDNLSRKGAT---DNL-HWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVS----------KIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM----RF------TNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI------


General information:
TITO was launched using:
RESULT:

Template: 1ORR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1804 -83844 -46.48 -268.73
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -46.48
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_1ORR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ORR-query.scw
PDB file : Tito_Scwrl_1ORR.pdb: