Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAIEFKEVEKSFQDGDQVVKALKETTMSIDKGEFVAIIGPSGSGKSTFLTLAGGLQTPSSGSVFINDQEFSNQKESERVKLRFKEIGFILQASNLVPFLTVKKQLLL----VDKIKHEHRQKEAKELFEQLGVDKLINKYPEELSGGERQRVAIARALYNDPSIILADEPTASLDSEKAREVVDILAKESKDKNKATIMVTHDTRLIDKC-DRIFMMEDGVLKEKE
2OLK Chain:D ((22-240))LQMIDVHQLKKSFGS----LEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLK-AKDTNLNKVR-EEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVM-KQLANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEE-


General information:
TITO was launched using:
RESULT:

Template: 2OLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1109 -25054 -22.59 -117.07
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain D : 0.82

3D Compatibility (PKB) : -22.59
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_2OLK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OLK-query.scw
PDB file : Tito_Scwrl_2OLK.pdb: